BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038G02SP1|AL430588
(928 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1800 1823 0.0
>3x_Contig1800
Length = 38778
Score = 1823 bits (919), Expect = 0.0
Identities = 927/929 (99%), Gaps = 1/929 (0%)
Strand = Plus / Plus
Query: 1 acatacattcctccccctctcgcctgccccataataattaaacaagttaacaaaaggcgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9428 acatacattcctccccctctcgcctgccccataataattaaacaagttaacaaaaggcgt 9487
Query: 61 tacctcttccgcatcctctccaatctcatacgattcccctttcatccgacttacccaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9488 tacctcttccgcatcctctccaatctcatacgattcccctttcatccgacttacccaaca 9547
Query: 121 agatacaggatctcagtgaaagatccttcctgccctccctgtctgttgtctactctacat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9548 agatacaggatctcagtgaaagatccttcctgccctccctgtctgttgtctactctacat 9607
Query: 181 gcgacttggaaggccaaaggactatcgcatgattattcgccgggaacccgcgagttccct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9608 gcgacttggaaggccaaaggactatcgcatgattattcgccgggaacccgcgagttccct 9667
Query: 241 gctcttttctttcaaaccaggcagcaaaccaggtgaacacactctgatgtagtgcagtcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9668 gctcttttctttcaaaccaggcagcaaaccaggtgaacacactctgatgtagtgcagtcc 9727
Query: 301 ctaagtcctttgaagattcggggagctagctacccacgcgaatgtaacaaaagaacattt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9728 ctaagtcctttgaagattcggggagctagctacccacgcgaatgtaacaaaagaacattt 9787
Query: 361 acttttgtggggggtggaaaagtcgattaggatcttgcagcacagaaactgcgcaggggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9788 acttttgtggggggtggaaaagtcgattaggatcttgcagcacagaaactgcgcaggggt 9847
Query: 421 ttttttcatcttggagaagcaactggctaaattcgacacaaacaaaaactgaaaaatgga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9848 ttttttcatcttggagaagcaactggctaaattcgacacaaacaaaaactgaaaaatgga 9907
Query: 481 aaataaaaaatgaaaaagcaagctgaattcgaagaagggagaattccgccttctgcaacc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9908 aaataaaaaatgaaaaagcaagctgaattcgaagaagggagaattccgccttctgcaacc 9967
Query: 541 acactaatggttggtagtcaatagatacgcattagaaggttactattttatgagtcgatc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9968 acactaatggttggtagtcaatagatacgcattagaaggttactattttatgagtcgatc 10027
Query: 601 cccgcggaaatttaggaattttaaacttgggcttgatatacgtcggtatagtgtatctgg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10028 cccgcggaaatttaggaattttaaacttgggcttgatatacgtcggtatagtgtatctgg 10087
Query: 661 tatttttgccaatggttcctgtgcccgtgcccgtgcccgtgtgctcatgcgatgcattgt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10088 tatttttgccaatggttcctgtgcccgtgcccgtgcccgtgtgctcatgcgatgcattgt 10147
Query: 721 gactactgcttggcaaggcaaatcagcggtctgcggccgtactctaaagccggacagaca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10148 gactactgcttggcaaggcaaatcagcggtctgcggccgtactctaaagccggacagaca 10207
Query: 781 tggtggggtgccttttcggtccataagtgt-amtagctagctacaagtatgttctgtgca 839
|||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 10208 tggtggggtgccttttcggtccataagtgtaactagctagctacaagtatgttctgtgca 10267
Query: 840 aagatggtaaaggttgcatacagtcaagttgctgtccttggacctggtctgacctgacct 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10268 aagatggtaaaggttgcatacagtcaagttgctgtccttggacctggtctgacctgacct 10327
Query: 900 agcttaacattgcatagcgcatacccact 928
|||||||||||||||||||||||||||||
Sbjct: 10328 agcttaacattgcatagcgcatacccact 10356
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5774
Number of Sequences: 1807
Number of extensions: 5774
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 928
length of database: 10,358,551
effective HSP length: 16
effective length of query: 912
effective length of database: 10,329,639
effective search space: 9420630768
effective search space used: 9420630768
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)